Detail publikačního výsledku

Relationships Of Bacterial Metallothioneins Analyses: Phylogenetic Tree Construction Method

ŠKUTKOVÁ, H.; PROVAZNÍK, I.; KIZEK, R.

Originální název

Relationships Of Bacterial Metallothioneins Analyses: Phylogenetic Tree Construction Method

Anglický název

Relationships Of Bacterial Metallothioneins Analyses: Phylogenetic Tree Construction Method

Druh

Stať ve sborníku v databázi WoS či Scopus

Originální abstrakt

Phylogenetics is a central discipline in the modern life sciences aimed at describing sequences similarity through evolutionary relationships among organisms. Although it may seem that the graphical representation of phylogenetic connection between organism is a mastered problem, the results always depend on correct choice of method of computation, especially for diverse data as sequences of bacterial metallothioneins. We shown how our used methods and algorithms in a suitable form gives a good results. The coupling a simple Jukes Cantor model with approximation to Poisson distribution for amino acids and BioNJ algorithm witch is more effectively for alignment sequences, we obtained the resulting tree structure forms closed units, which corresponds to their affinity.

Anglický abstrakt

Phylogenetics is a central discipline in the modern life sciences aimed at describing sequences similarity through evolutionary relationships among organisms. Although it may seem that the graphical representation of phylogenetic connection between organism is a mastered problem, the results always depend on correct choice of method of computation, especially for diverse data as sequences of bacterial metallothioneins. We shown how our used methods and algorithms in a suitable form gives a good results. The coupling a simple Jukes Cantor model with approximation to Poisson distribution for amino acids and BioNJ algorithm witch is more effectively for alignment sequences, we obtained the resulting tree structure forms closed units, which corresponds to their affinity.

Klíčová slova

phylogentic tree, neigbour-joining, BIONJ, Jukes-Cantor, metallothionein

Klíčová slova v angličtině

phylogentic tree, neigbour-joining, BIONJ, Jukes-Cantor, metallothionein

Autoři

ŠKUTKOVÁ, H.; PROVAZNÍK, I.; KIZEK, R.

Rok RIV

2011

Vydáno

30.06.2010

Nakladatel

VUT v Brně

Místo

Brno

ISBN

978-80-214-4106-4

Kniha

Analysis of Biomedical Signals and Images

ISSN

1211-412X

Periodikum

Analysis of Biomedical Signals and Images

Svazek

12

Stát

Česká republika

Strany od

1

Strany do

6

Strany počet

6

Plný text v Digitální knihovně

http://hdl.handle.net/

BibTex

@inproceedings{BUT35864,
  author="Helena {Vítková} and Valentýna {Provazník} and René {Kizek}",
  title="Relationships Of Bacterial Metallothioneins Analyses: Phylogenetic Tree Construction Method",
  booktitle="Analysis of Biomedical Signals and Images",
  year="2010",
  journal="Analysis of Biomedical Signals and Images",
  volume="12",
  number="20",
  pages="1--6",
  publisher="VUT v Brně",
  address="Brno",
  isbn="978-80-214-4106-4",
  issn="1211-412X"
}