Detail publikačního výsledku

Similarity/Dissimilarity Analysis of COI Mitochondrial Gene of Chosen Bird Species Based on Nucleotide Density

MADĚRÁNKOVÁ, D.; PROVAZNÍK, I.

Originální název

Similarity/Dissimilarity Analysis of COI Mitochondrial Gene of Chosen Bird Species Based on Nucleotide Density

Anglický název

Similarity/Dissimilarity Analysis of COI Mitochondrial Gene of Chosen Bird Species Based on Nucleotide Density

Druh

Stať ve sborníku v databázi WoS či Scopus

Originální abstrakt

Mitochondrial cytochrome c oxidase I (COI) genes may be used for DNA barcoding. It allows quick species identification of unknown sample. Intent of DNA barcoding is identification of new and closely related species. We report similarity/dissimilarity analysis of COI mitochondrial gene sequences of seventeen species of birds of prey. Their DNA sequences were represented in numerical form based on nucleotide densities. The similarity/dissimilarity analysis was based on evaluation of Euclidean distances between sequences. Results of similarity/dissimilarity analysis of sequences in numerical representation were also compared with phylogenetic three based on Jukes-Cantor method.

Anglický abstrakt

Mitochondrial cytochrome c oxidase I (COI) genes may be used for DNA barcoding. It allows quick species identification of unknown sample. Intent of DNA barcoding is identification of new and closely related species. We report similarity/dissimilarity analysis of COI mitochondrial gene sequences of seventeen species of birds of prey. Their DNA sequences were represented in numerical form based on nucleotide densities. The similarity/dissimilarity analysis was based on evaluation of Euclidean distances between sequences. Results of similarity/dissimilarity analysis of sequences in numerical representation were also compared with phylogenetic three based on Jukes-Cantor method.

Klíčová slova

COI gene, nucleotide density, similarity analysis

Klíčová slova v angličtině

COI gene, nucleotide density, similarity analysis

Autoři

MADĚRÁNKOVÁ, D.; PROVAZNÍK, I.

Rok RIV

2011

Vydáno

02.11.2010

Nakladatel

IEEE

Místo

Korfu

ISBN

978-1-4244-6560-6

Kniha

10th International Conference on Information Technology and Application in Biomedicine

Strany od

1

Strany do

4

Strany počet

4

BibTex

@inproceedings{BUT24190,
  author="Denisa {Maděránková} and Valentýna {Provazník}",
  title="Similarity/Dissimilarity Analysis of COI Mitochondrial Gene of Chosen Bird Species Based on Nucleotide Density",
  booktitle="10th International Conference on Information Technology and Application in Biomedicine",
  year="2010",
  pages="1--4",
  publisher="IEEE",
  address="Korfu",
  isbn="978-1-4244-6560-6"
}