Detail publikačního výsledku

Pipeline for visualization of gene expression profiles of Clostridium beijerinckii NRRL B-598

JUREČKOVÁ, K.; SEDLÁŘ, K.; PROVAZNÍK, I.

Originální název

Pipeline for visualization of gene expression profiles of Clostridium beijerinckii NRRL B-598

Anglický název

Pipeline for visualization of gene expression profiles of Clostridium beijerinckii NRRL B-598

Druh

Stať ve sborníku v databázi WoS či Scopus

Originální abstrakt

Gene expression profiling is a key to understanding of the patterns of gene activity at the transcription level for example under different conditions. In specific cell it capture current state of genes’ activity and give us a picture of cellular function together with connections to genomic features. In this study, we present a pipeline for processing of transcriptomic RNA-Seq data of Clostridium beijerinckii NRRL B-598 and visualization of gene expression profiles by heatmaps.

Anglický abstrakt

Gene expression profiling is a key to understanding of the patterns of gene activity at the transcription level for example under different conditions. In specific cell it capture current state of genes’ activity and give us a picture of cellular function together with connections to genomic features. In this study, we present a pipeline for processing of transcriptomic RNA-Seq data of Clostridium beijerinckii NRRL B-598 and visualization of gene expression profiles by heatmaps.

Klíčová slova

RNA-Seq; gene expression profile; heatmaps

Klíčová slova v angličtině

RNA-Seq; gene expression profile; heatmaps

Autoři

JUREČKOVÁ, K.; SEDLÁŘ, K.; PROVAZNÍK, I.

Rok RIV

2020

Vydáno

09.09.2019

Nakladatel

Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií

Místo

Brno

ISBN

978-80-214-5781-2

Kniha

Proceedings of IEEE Student Branch Conference Mikulov 2019

Strany od

10

Strany do

12

Strany počet

3

URL

http://www.radio.feec.vutbr.cz/ieee/userfiles/downloads/archive/2019-Mikulov/sbornik.pdf

BibTex

@inproceedings{BUT159005,
  author="Kateřina {Šabatová} and Karel {Sedlář} and Valentýna {Provazník}",
  title="Pipeline for visualization of gene expression profiles of Clostridium beijerinckii NRRL B-598",
  booktitle="Proceedings of IEEE Student Branch Conference Mikulov 2019",
  year="2019",
  pages="10--12",
  publisher="Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií",
  address="Brno",
  isbn="978-80-214-5781-2",
  url="http://www.radio.feec.vutbr.cz/ieee/userfiles/downloads/archive/2019-Mikulov/sbornik.pdf"
}