pqsfinder: an R/Bioconductor package for identification of potential quadruplex forming sequences

pqsfinder: an R/Bioconductor package for identification of potential quadruplex forming sequences

Software

The main functionality of the this package is to detect DNA sequence patterns that are likely to fold into an intramolecular G-quadruplex (G4). Unlike many other approaches, this package is able to detect sequences responsible for G4s folded from imperfect G-runs containing bulges or mismatches and as such is more sensitive than competing algorithms.

The main functionality of the this package is to detect DNA sequence patterns that are likely to fold into an intramolecular G-quadruplex (G4). Unlike many other approaches, this package is able to detect sequences responsible for G4s folded from imperfect G-runs containing bulges or mismatches and as such is more sensitive than competing algorithms.

G-quadruplex; quadruplex; DNA; R; Bioconductor; pattern matching; searching; annotation

G-quadruplex; quadruplex; DNA; R; Bioconductor; pattern matching; searching; annotation

http://bioconductor.org/packages/release/bioc/html/pqsfinder.html

Využití výsledku jiným subjektem je v některých případech možné bez nabytí licence

http://bioconductor.org/packages/release/bioc/html/pqsfinder.html

pqsfinder