Národní infrastruktura pro biologické a medicínské zobrazování Czech-BioImaging je distribuovanou výzkumnou infrastrukturou špičkových zobrazovacích pracovišť, která od roku 2016 poskytuje uživatelům otevřený přístup k širokému portfoliu zobrazovacích metod, např. pokročilé světelné mikroskopii, fluorescenční mikroskopii, super-rezoluční mikroskopii, kryo/elektronové mikroskopii, přípravě vzorků, magnetické rezonanci, tkáňovému a orgánovému zobrazování, zobrazování pomocí magnetických částic a analýze obrazu.

Description in English
The aim of Czech-BioImaging is to continue to develop a harmonized national network that coordinates the development of biomedical imaging, raises awareness of progressive imaging methods among the scientific, medical and application community, sets standardized open access to imaging devices and creates educational programs and courses for this field. As a result, there is a significant qualitative stimulation of research activities in biomedicine and facilitation of the acquisition of technologically advanced knowledge by the entire spectrum of biomedical departments in the Czech Republic - also due to the synergistic positive effect due to the creation of new valuable collaborations between domestic and foreign facilities.

Keywords
biologické a medicínské zobrazování

Key words in English
Biomedical imaging, open access, Czech-BioImaging, microscopy

LM2023050

Czech

Zicha Daniel, doc. Ing., CSc. - principal person responsible

Biophotonics Core Facility
- responsible department (9.2.2023 - not assigned)
Biophotonics Core Facility
- beneficiary (9.2.2023 - not assigned)

ŠURÁŇOVÁ, M.; ĎURIŠ, M.; ŠTENGLOVÁ NETÍKOVÁ, I.; BRÁBEK, J.; HORÁK, T.; JŮZOVÁ, V.; CHMELÍK, R.; VESELÝ, P. Primary assessment of medicines for expected migrastatic potential with holographic incoherent quantitative phase imaging. Biomedical Optics Express, 2023, vol. 14, no. 6, p. 2689-2708. ISSN: 2156-7085.
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VELLUVAKANDY, R.; JU, X.; PUMERA, M. Nanorobot-Cell Communication via In Situ Generation of Biochemical Signals: Toward Regenerative Therapies. ACS Nano, 2025, vol. 19, no. 25, p. 22953-22967. ISSN: 1936-086X.
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Lopez, MG.; Huteckova, B.; Lavicky, J.; Zezula, N.; Rakultsev, V.; Fridrichova, V.; Tuaima, H.; Nottmeier, C.; Petersen, J.; Kavkova, M.; Zikmund, T.; Kaiser, J.; Lav, R.; Star, H.; Bryja, V.; Henys, P.; Vorechovsky, M.; Tucker, AS.; Harnos, J.; Buchtova, M. ; Krivanek, J. Spatiotemporal monitoring of hard tissue development reveals unknown features of tooth and bone development. Science Advances, 2023, vol. 9, no. 31, 17 p. ISSN: 2375-2548.
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ŠIŠKA VIRÁGOVÁ, E.; NOVOTNÁ, L.; CHLUP, Z.; ŠŤASTNÝ, P.; ŠÁRFY, P.; CIHLÁŘ, J.; KUČÍREK, M.; BENÁK, L.; STREIT, L.; KOCANDA, J.; SKLENSKÝ, J.; FILIPOVIČ, M.; REPKO, M.; HAMPL, A.; KOUTNÁ, I.; ČÁSTKOVÁ, K. Porous silica-doped calcium phosphate scaffolds prepared via in-situ foaming method. Ceramics International, 2024, vol. 50, no. 21, p. 41215-41227. ISSN: 1873-3956.
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BOUCHAL, Z.; BOUCHAL, P.; CHMELÍKOVÁ, T.; FIURÁSEK, J. On quantitativeness of diffraction-limited quantitative phase imaging. APL Photonics, 2024, vol. 9, no. 12, p. 126111-1 (126111-14 p.)ISSN: 2378-0967.
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Kanli, G.; Perlo, D.; Boudissa, S.;Jirik, R.; Keunen, O. Simultaneous Image Quality Improvement and Artefacts Correction in Accelerated MRI. In Lecture Notes in Computer Science. Lecture Notes in Computer Science. 15241. Springer, Cham, 2024. p. 228-237. ISBN: 9783031732836. ISSN: 1611-3349.
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HAVLÍKOVÁ, T.; PAPEŽ, N.; FOHLEROVÁ, Z.; KASPAR, P.; DALLAEV, R.; ČÁSTKOVÁ, K.; ŢĂLU, Ş. Adaptability of Electrospun PVDF Nanofibers in Bone Tissue Engineering. Polymers, 2025, vol. 17, no. 3, 23 p. ISSN: 2073-4360.
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BOUCHAL, P.; VIEWEGH, P.; LIŠKA, P.; CHMELÍK, R.; BOUCHAL, Z. Spin-Orbit Photonics with Potato Starch Lenses. Advanced Optical Materials, 2025, vol. 13, no. 21, 13 p. ISSN: 2195-1071.
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FLEISCHHACKER-DAFFERT, C.; ZEROBIN, A.; HUMMEL, F.; SLANINOVÁ, E.; KROUPOVÁ, Z.; OBRUČA, S.; MRÁZOVÁ, K.; HRUBANOVÁ, K.; KRZYŽÁNEK, V.; NEBESÁŘOVÁ, J.; LUDWIG, K.; FRITZ, I. A Comparison of the Effects of Continuous Illumination and Day/Night Regimes on PHB Accumulation in Synechocystis Cells. Life-Basel, 2024, vol. 14, no. 7, p. 1-18. ISSN: 2075-1729.
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JU, X.; JAVORKOVÁ, E.; MICHALIČKA, J.; PUMERA, M. Single-Atom Colloidal Nanorobotics Enhanced Stem Cell Therapy for Corneal Injury Repair. ACS Nano, 2025, vol. 19, no. 20, p. 19095-19115. ISSN: 1936-086X.
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LAZNICKA, T.; KIZOVSKÝ, M.; HRUBANOVÁ, K.; JEZEK, J.; MRÁZOVÁ, K.; OBRUČA, S.; SAMEK, O.; KRZYŽÁNEK, V. Assembly for semi-correlation analysis of samples using cryogenic scanning electron microscopy and cryogenic Raman micro-spectroscopy. MEASUREMENT SCIENCE and TECHNOLOGY, 2025, vol. 36, no. 5, p. 1-10. ISSN: 1361-6501.
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ĎURIŠ, M.; BOUCHAL, P.; CHMELÍK, R. Single-shot super-resolution quantitative phase imaging allowed by coherence gate shaping. APL Photonics, 2023, vol. 8, no. 4, p. 1-9. ISSN: 2378-0967.
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SVOZILOVA, H.; VOJTOVÁ, L.; MATULOVÁ, J.; BRUKNEROVA, J.; POLÁKOVÁ, V.; RADOVÁ, L.; DOUBEK, M.; PLEVOVÁ, K.; POSPÍŠILOVÁ, Š. In vitro culture of leukemic cells in collagen scaffolds and carboxymethyl cellulose-polyethylene glycol gel. PeerJ, 2024, vol. 12, no. 12, p. 1-30. ISSN: 2167-8359.
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DOSTÁL, Z.; ŽÁKOVÁ, V.; VESELÝ, P. Dynamic cell-mass movement analyses tool. Computer Methods and Programs in Biomedicine, 2025, vol. 268, no. 8, p. 1-8.
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SMOLNICKÁ, A.; LIPOVÝ, B.; PAVLIŇÁKOVÁ, V.; HOLOUBEK, J.; FALDYNA, M.; JEKLOVÁ, E.; VOJTOVÁ, L.; KOUTNÁ, I. Multilayered cellular skin substitute with biomimetic collagen-chitosan scaffold. Bioimplantologie a regenerativní medicína 2024. Praha: 2024. p. 45-45. ISBN: 978-80-01-07293-6.
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CHMELIK, R.; MICHALKOVA, I.; DOSTAL, Z.; DURIS, M.; SLABA, M. Holographic Incoherent-light-source Quantitative Phase Imaging: An Alternative to Holographic Tomography. In Progress in Biomedical Optics and Imaging Proceedings of SPIE. Progress in biomedical optics and imaging. SPIE, 2025. 6 p. ISBN: 9781510684065.
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HÝVLOVÁ, D.; VITOUŠ, J.; JIŘÍK, R. Comparison of Pharmacokinetic Models for Quantification of Blood-Brain-Barrier Opening Induced by Focused Ultrasound. In Proceedings II of the 29th Conference STUDENT EEICT 2023 Selected papers. Proceedings II of the Conference STUDENT EEICT. 1. Brno: Brno University of Technology, Faculty of Electrical Engineering and Communication, 2023. p. 133-136. ISBN: 978-80-214-6154-3. ISSN: 2788-1334.
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Responsibility: Zicha Daniel, doc. Ing., CSc.