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Doctoral Thesis
Author of thesis: Ing. Diana Černayová, Ph.D.
Acad. year: 2025/2026
Supervisor: prof. Ing. Stanislav Obruča, Ph.D.
Reviewers: Assoc. Prof. Wojciech Bialas, PhD., Prof. Dr.-Ing. Jochen Schmid
Plant Growth-Promoting Rhizobacteria (PGPR) serve as effective bioinoculants that stimulate plant growth and enhance soil fertility. Encapsulating PGPR within hydrogel matrices provides a protective environment that improves their survival, stability and overall bioactivity in agricultural applications. This dissertation presents a novel self-encapsulation method employing Azotobacter vinelandii, a bacterium capable of synthesizing its own alginate, a natural exopolysaccharide that forms a stable gel upon Ca2+ crosslinking. Six A. vinelandii strains from German and Czech microbial collections were investigated for their growth performance, alginate yield and plant growth-promoting traits. Among them, strains DSM 87, DSM 720 and CCM 289 produced the alginate concentrations (4.9 ± 0.6 g/L, 3.5 ± 0.5 g/L and 2.2 ± 0.3 g/L, respectively) with easy ability to form strong gels. These strains also demonstrated strong PGPR activities, including indole-3-acetic acid production (up to 10.5 μg/mL), siderophore synthesis and phosphate solubilization. Further experiments focused on different gelation possibilities including multivalent ions, organic acids and gelation in the whole volume by dissolving insoluble CaCO3 presented in the cultivation media. Focusing on application and industrial potential of this process for biofertilizer production, the entire procedure was up-scaled to bioreactors, where the effects of agitation speed and filling volume were tested for strain DSM 87. To evaluate the plant growth-stimulation properties of the obtained bacterial gels, lettuce plants were cultivated under different treatment conditions. The results demonstrated that bacterial gelled cultures positively influenced plant growth and improved plant survival under drought stress. This work demonstrates a cost-effective and environmentally sustainable approach to bioinoculant production by using A. vinelandii’s alginate-forming capacity, providing a promising alternative to conventional biofertilization methods.
Plant growth-promoting rhizobacteria, PGPR, alginate, polyhydroxyalkanoates, biopolymers, bioinoculants, agriculture, cultivation experiments
Date of defence
22.01.2026
Result of the defence
Defended (thesis was successfully defended)
Process of defence
Obhajoba probíhala v angličtině. Jeden ze zahraničních oponentů prof. Schmid se připojil prostřednictvím MS Teams. Předsedkyně komise představila doktorandku a předala jí slovo. Ing. Černayová absolvovala v roce 2023 pedagogické minimum. V roce 2023 absolvovala stáž ve Švédsku. Již nyní má určité pracovní zkušenosti. Je spoluautorkou 3 článků v časopisech s impakt faktorem. Je také spoluautorkou celé řady konferenčních příspěvků. Language of a defence was English. One of the foreign reviewers, Prof. Schmid, joined via MS Teams. The chairwoman of the committee introduced the doctoral student and gave her the floor. Ing. Černayová completed her pedagogical minimum in 2023. In 2023, she also completed an internship in Sweden. She already has some work experience. She is a co-author of three articles in journals with an impact factor. She is also a co-author of numerous conference papers.
Language of thesis
English
Faculty
Fakulta chemická
Department
Institute of Food Science and Biotechnology
Study programme
Biophysical Chemistry (DKCP_BCH)
Composition of Committee
prof. RNDr. Ivana Márová, CSc. (předseda) doc. Ing. Barbora Branská, PhD. (člen) doc. Mgr. Pavel Dvořák, Ph.D. (člen) prof. Mgr. Marek Koutný, Ph.D. (člen) doc. Ing. Petr Sedláček, Ph.D. (člen) Prof. Dr.-Ing. Jochen Schmid (člen) Assoc. Prof. Wojciech Bialas, PhD. (člen)
Supervisor’s reportprof. Ing. Stanislav Obruča, Ph.D.
Reviewer’s reportAssoc. Prof. Wojciech Bialas, PhD.
Reviewer’s reportProf. Dr.-Ing. Jochen Schmid
Responsibility: Mgr. et Mgr. Hana Odstrčilová