Publication result detail

Detection of Repeated DNA Sequences Using Digital Signal Processing Tools

KUBICOVÁ, V.; NEDVĚD, J.; PROVAZNÍK, I.

Original Title

Detection of Repeated DNA Sequences Using Digital Signal Processing Tools

English Title

Detection of Repeated DNA Sequences Using Digital Signal Processing Tools

Type

Paper in proceedings (conference paper)

Original Abstract

The vision of medicine is to know and understand the genome of each patient. Based on this knowledge, the susceptibility to diseases can be determined. Nearly 45 % of the human genome consists of repetitive sequences. The multiplication of a repetitive pattern is often related to a number of diseases. The work deals with the study of methods for finding repeats in DNA sequences using digital signal processing methods, mainly with analysis of DNA in frequency domain. The importance of amplitude and phase spectra is described and setting up the appropriate parameters for detection of tandem repeats from the spectra.

English abstract

The vision of medicine is to know and understand the genome of each patient. Based on this knowledge, the susceptibility to diseases can be determined. Nearly 45 % of the human genome consists of repetitive sequences. The multiplication of a repetitive pattern is often related to a number of diseases. The work deals with the study of methods for finding repeats in DNA sequences using digital signal processing methods, mainly with analysis of DNA in frequency domain. The importance of amplitude and phase spectra is described and setting up the appropriate parameters for detection of tandem repeats from the spectra.

Keywords

repetitive DNA sequences, spectrogram, phase spectrum, amplitude spectrum

Key words in English

repetitive DNA sequences, spectrogram, phase spectrum, amplitude spectrum

Authors

KUBICOVÁ, V.; NEDVĚD, J.; PROVAZNÍK, I.

RIV year

2014

Released

05.07.2013

Publisher

Technická univerzita v Košiciach

Location

Košice

ISBN

978-80-8086-208-4

Book

Trendy v biomedicínskom inžinierstve 2013, Zborníkkonferencie

Edition

1

Pages from

129

Pages to

132

Pages count

4

BibTex

@inproceedings{BUT101944,
  author="Vladimíra {Kubicová} and Jiří {Nedvěd} and Valentýna {Provazník}",
  title="Detection of Repeated DNA Sequences Using Digital Signal Processing Tools",
  booktitle="Trendy v biomedicínskom inžinierstve 2013, Zborníkkonferencie",
  year="2013",
  series="1",
  number="1",
  pages="129--132",
  publisher="Technická univerzita v Košiciach",
  address="Košice",
  isbn="978-80-8086-208-4"
}