Caldimonas thermodepolymerans is a promising PHA producer. We know the capabilities and requirements of this bacteria, we have sequenced its genome and subjected it to various bioinformatic analyses, which have also uncovered unexplored regions – sRNAs. This project has great biotechnological and publication potential, as it is principally basic research with overlap into applied research – a closer understanding of the metabolic pathway of PHA would directly lead to an increase in biotechnological production of this, in result, biopolymer.

FCH/FEKT-J-25-8798

Czech

Šlosárová Katarína, Ing. - principal person responsible
Heřmánková Kristýna, Ing. - fellow researcher
Obruča Stanislav, prof. Ing., Ph.D. - fellow researcher
Sedlář Karel, doc. Mgr. Ing., Ph.D. - fellow researcher

Faculty of Chemistry
- responsible department (27.1.2025 - not assigned)
Department of Biomedical Engineering
- internal (1.1.2025 - 31.12.2025)
Faculty of Electrical Engineering and Communication
- internal (1.1.2025 - 31.12.2025)
Institute of Food Science and Biotechnology
- internal (1.1.2025 - 31.12.2025)
Faculty of Chemistry
- beneficiary (1.1.2025 - 31.12.2025)

HEŘMÁNKOVÁ, K.; SEDLÁŘ, K.; ŠLOSÁROVÁ, K.; OBRUČA, S. From RNA-Seq to Regulatory Small RNAs in Non- Model Bacteria for Biotechnological Applications. Book of Abstracts ISMB/ECCB 2025. Liverpool, UK: 2025. p. 912-913.
Detail

HEŘMÁNKOVÁ, K.; SEDLÁŘ, K. Structural and functional annotation of small RNA sequences in non-model bacteria. Telč: 1st Czech PhD Bioinformatics Conference, 2025.
Detail

Responsibility: Šlosárová Katarína, Ing.