Course detail
Biological system modelling
FEKT-MMOBAcad. year: 2012/2013
Biological (medical and ecological) system, desriction of its properties. Theoretical approaches used for modeling of biologcial systems (compartment systems, deterministic chaos). Description of basic biological models - models of population dynamics, epidemiological models, models of biochemical processes, models of tissue structure, examples of basic models of human organism
Language of instruction
Number of ECTS credits
Mode of study
Guarantor
Learning outcomes of the course unit
Prerequisites
Co-requisites
Planned learning activities and teaching methods
Assesment methods and criteria linked to learning outcomes
Course curriculum
Work placements
Aims
Specification of controlled education, way of implementation and compensation for absences
Recommended optional programme components
Prerequisites and corequisites
Basic literature
JIŘÍK,R.: Modely v biologii a epidemiologii. El. skripta VUT v Brně, 2006. (CS)
Recommended reading
V. Eck, M. Razím, Biokybernetika, skripta ČVUT v Praze, 1998. (CS)
Classification of course in study plans
- Programme EEKR-M Master's
branch M-BEI , 1 year of study, winter semester, elective specialised
- Programme EEKR-M Master's
branch M-BEI , 1 year of study, winter semester, compulsory
- Programme EEKR-M Master's
branch M-KAM , 2 year of study, winter semester, elective interdisciplinary
- Programme EEKR-M Master's
branch M-KAM , 2 year of study, winter semester, elective interdisciplinary
- Programme EEKR-CZV lifelong learning
branch EE-FLE , 1 year of study, winter semester, compulsory
Type of course unit
Lecture
Teacher / Lecturer
Syllabus
2. Modelling and simulation - identification of model parameters, ways of describing the model
3. Mathematical and computer models - analysis of the mathematical model, computer models and simulations
4. Models of single species populations - Malthus, Pearl-Verhulst, Hutchinson and Leslie
5. Models of two species populations - predator-prey, competitive and mutualistic populations
6. Models of cardiovascular system - hemodynamic parameters, Windkessel models
7. Models of action potential impulse - Hodgkin-Huxley model
8. Models of respiratory system - mechanical ventilatory
9. Pharmacokinetical models - compartment model of diffusion, pharmacokinetic parameters, multi compartment models
10. Epidemiological models - models SIR, SEIR, SI a SIS
11. Deterministic chaos - chaos in biological systems, fractals in biological systems
12. Catastrophe theory - basic types of catastrophes, butterfly catastrophe
13. Discrete event systems - finite-state automata, models of celular and tissue structures, artificial life
Exercise in computer lab
Teacher / Lecturer
Syllabus
2. Models of single species populations
3. Models of two species populations
4. Models of cardiovascular system
5. Pharmacokinetical models
6. Epidemiological models