Publication detail

Properties of Current Signals in Nanopore Sequencing

PLOCKOVÁ, V. SEDLÁŘ, K.

Original Title

Properties of Current Signals in Nanopore Sequencing

Type

conference paper

Language

English

Original Abstract

Oxford Nanopore technologies brought new and revolutionary technology in the field of DNA sequencing. Their sequencing device measures changes in the electric current flowing through pores together with DNA. This work aims to describe differences between raw signals produced by various sequencing kits and sequencing flowcells while sequencing several different bacteria. Two datasets combining five different organisms, two sequencing kits, and two types of flowcells were used to analyze various statistical parameters that would be suitable for the description of current signals gathered from nanopores.

Keywords

current signal, Oxford Nanopore Technologies, sequencing, statistical parameters, clustering.

Authors

PLOCKOVÁ, V.; SEDLÁŘ, K.

Released

26. 4. 2022

Publisher

Brno University of Technology, Faculty of Electrical Engineering and Communication

Location

Brno

ISBN

978-80-214-6029-4

Book

Proceedings I of the 28th Conference STUDENT EEICT 2022

Edition

1

Pages from

120

Pages to

123

Pages count

4

URL

https://www.eeict.cz/eeict_download/archiv/sborniky/EEICT_2022_sbornik_1_v2.pdf

BibTex

@inproceedings{BUT188046,
  author="Veronika {Plocková} and Karel {Sedlář}",
  title="Properties of Current Signals in Nanopore Sequencing",
  booktitle="Proceedings I of the 28th Conference STUDENT EEICT 2022",
  year="2022",
  series="1",
  pages="120--123",
  publisher="Brno University of Technology, Faculty of Electrical Engineering and Communication",
  address="Brno",
  isbn="978-80-214-6029-4",
  url="https://www.eeict.cz/eeict_download/archiv/sborniky/EEICT_2022_sbornik_1_v2.pdf"
}