Publication result detail

MInfer: Bridging MetaboAnalyst and Jacobian analysis for metabolomic networks

SCHWARZEROVÁ, J.; MATE, E.; IDKOWIAK, J.; OLEŠOVÁ, D.; KVASNIČKA, A.; DOBESOVA, D.; FRIEDECKÝ, D.; PROVAZNÍK, V.; SKARDA, J.; WECKWERTH, W.; NÄGELE, T.

Original Title

MInfer: Bridging MetaboAnalyst and Jacobian analysis for metabolomic networks

English Title

MInfer: Bridging MetaboAnalyst and Jacobian analysis for metabolomic networks

Type

WoS Article

Original Abstract

Metabolomic interaction networks provide critical insights into the dynamic relationships between metabolites and their regulatory mechanisms. This study introduces MInfer, a novel computational framework that integrates outputs from MetaboAnalyst, a widely used metabolomic analysis tool, with Jacobian analysis to enhance the derivation and interpretation of these networks.

English abstract

Metabolomic interaction networks provide critical insights into the dynamic relationships between metabolites and their regulatory mechanisms. This study introduces MInfer, a novel computational framework that integrates outputs from MetaboAnalyst, a widely used metabolomic analysis tool, with Jacobian analysis to enhance the derivation and interpretation of these networks.

Keywords

Metabolomic data analysis, Systems biology, Metabolite interactions, Dynamic relationships

Key words in English

Metabolomic data analysis, Systems biology, Metabolite interactions, Dynamic relationships

Authors

SCHWARZEROVÁ, J.; MATE, E.; IDKOWIAK, J.; OLEŠOVÁ, D.; KVASNIČKA, A.; DOBESOVA, D.; FRIEDECKÝ, D.; PROVAZNÍK, V.; SKARDA, J.; WECKWERTH, W.; NÄGELE, T.

RIV year

2025

Released

13.02.2025

Publisher

Elsevier

ISBN

0169-2607

Periodical

Computer Methods and Programs in Biomedicine

Volume

263

Number

1

State

Kingdom of the Netherlands

Pages from

1

Pages to

8

Pages count

8

URL

https://www.sciencedirect.com/science/article/pii/S0169260725000896

Full text in the Digital Library

http://hdl.handle.net/11012/250731

BibTex

@article{BUT197534,
  author="Jana {Schwarzerová} and Erdő Gabor {Mate} and Jakub {Idkowiak} and Dominika {Olešová} and Aleš {Kvasnička} and Dana {Dobesova} and David {Friedecký} and Valentýna {Provazník} and Jozef {Skarda} and Wolfram {Weckwerth} and Thomas {Nägele}",
  title="MInfer: Bridging MetaboAnalyst and Jacobian analysis for metabolomic networks
",
  journal="Computer Methods and Programs in Biomedicine",
  year="2025",
  volume="263",
  number="1",
  pages="1--8",
  doi="10.1016/j.cmpb.2025.108672",
  issn="0169-2607",
  url="https://www.sciencedirect.com/science/article/pii/S0169260725000896"
}