Publication result detail

Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms

VAIBAROVA, V.; KRÁLOVÁ, S.; PALÍKOVÁ, M.; SCHWARZEROVÁ, J.; NEJEZCHLEBOVÁ, J.; ČEJKOVÁ, D.; ČÍŽEK, A.

Original Title

Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms

English Title

Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms

Type

WoS Article

Original Abstract

The salmonid pathogen Flavobacterium psychrophilum poses a significant economic threat to global aquaculture, yet our understanding of its genetic and phenotypic diversity remains incomplete across much of its geographic range. In this study, we characterise the genetic and phenotypic diversity of 70 isolates collected from rainbow trout (Oncorhynchus mykiss) and brown trout (Salmo trutta m. fario) from fish farms in the Czech Republic between 2012 and 2019 to compare their genomic content with all draft or complete genomes present in the NCBI database (n = 187).

English abstract

The salmonid pathogen Flavobacterium psychrophilum poses a significant economic threat to global aquaculture, yet our understanding of its genetic and phenotypic diversity remains incomplete across much of its geographic range. In this study, we characterise the genetic and phenotypic diversity of 70 isolates collected from rainbow trout (Oncorhynchus mykiss) and brown trout (Salmo trutta m. fario) from fish farms in the Czech Republic between 2012 and 2019 to compare their genomic content with all draft or complete genomes present in the NCBI database (n = 187).

Keywords

Flavobacterium psychrophilum, Genetic diversity, Antimicrobial resistance

Key words in English

Flavobacterium psychrophilum, Genetic diversity, Antimicrobial resistance

Authors

VAIBAROVA, V.; KRÁLOVÁ, S.; PALÍKOVÁ, M.; SCHWARZEROVÁ, J.; NEJEZCHLEBOVÁ, J.; ČEJKOVÁ, D.; ČÍŽEK, A.

RIV year

2025

Released

18.09.2024

Publisher

BioMed Central

ISBN

1471-2180

Periodical

BMC Microbiology

Volume

24

Number

1

State

United Kingdom of Great Britain and Northern Ireland

Pages from

1

Pages to

15

Pages count

15

URL

https://bmcmicrobiol.biomedcentral.com/articles/10.1186/s12866-024-03490-3

Full text in the Digital Library

http://hdl.handle.net/11012/250728

BibTex

@article{BUT189681,
  author="Vera {Vaibarova} and Stanislava {Králová} and Miroslava {Palíková} and Jana {Schwarzerová} and Julie {Nejezchlebová} and Darina {Čejková} and Alois {Čížek}",
  title="Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms",
  journal="BMC Microbiology",
  year="2024",
  volume="24",
  number="1",
  pages="1--15",
  doi="10.1186/s12866-024-03490-3",
  url="https://bmcmicrobiol.biomedcentral.com/articles/10.1186/s12866-024-03490-3"
}